Escherichia coli DEC2E |
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Putative Escherichia coli DEC2E RM systems
Ref: Hazen,T.H. et al. J. Bacteriol. 194 (11), 3026-3027 (2012)
REBASE ref # 14514
GenBank #: AIFD00000000
REBASE acronym: EcoDEC2E
Org_num: 9021
All begin ECDEC2E_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5066 | 180 aa hypothetical protein | |||
| 5067 | R | EcoECB1ORF9045P (100% identity) | EcoDEC2EORF5068P | |
| ??? | M | M.EcoDEC2DORF4922P (99% identity) | M.EcoDEC2EORF5068P | |
| 5070 | S | DNA-specific restriction modification | S.EcoDEC2EORF5068P | |
| 5071 | 238 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 991 | phage/conjugal plasmid C-4 type zinc finger, | |||
| 992 | M | M.EcoZ01ORF1668P (100% identity) | GATC | M.EcoDEC2EORF992P |
| 993 | bacteriophage replication protein | |||
| 1309 | 65 aa hypothetical protein | |||
| 1310 | M | M.EcoS7438ORFNP (100% identity) | M.EcoDEC2EORF1310P | |
| 1313 | membrane protein | |||
| 2221 | carboxylate/Amino Acid/Amine Transporter family | |||
| 2222 | V | V.EcoDEC2DDcmP (100% identity) | V.EcoDEC2EDcmP | |
| 2223 | M | M.EcoSC477DcmP (100% identity) | CCWGG | M.EcoDEC2EDcmP |
| 2224 | HD domain protein | |||
| 3918 | fis transcriptional dual regulator | |||
| 3919 | M | M.EcoS6995ORFBP (100% identity) | ATGCAT | M.EcoDEC2EORF3919P |
| 3920 | 37 aa hypothetical protein | |||
| 4029 | ribulose-phosphate 3-epimerase | |||
| 4030 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoDEC2EDamP |
| 4031 | cell division protein DamX | |||
| 4906 | 82 aa hypothetical protein | |||
| 4907 | M | M.SflFF35ORF16050P (100% identity) | GATC | M.EcoDEC2EORF4907P |
| 4908 | lexA DNA binding domain protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4408 | helicase conserved C-terminal domain protein | |||
| 4409 | M | M.EcoSCU172ORF3240P (78% identity) | M.EcoDEC2EORF4409P | |
| ??? | M | DNA methylase family protein | M.EcoDEC2EORFAP | |
| 5214 | R | EcoSCU172ORF3240P (100% identity) | EcoDEC2EORFAP | |
| 5215 | restriction endonuclease | |||