Escherichia coli DEC2C |
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Putative Escherichia coli DEC2C RM systems
Ref: Hazen,T.H. et al. J. Bacteriol. 194 (11), 3026-3027 (2012)
REBASE ref # 14514
GenBank #: AIFB00000000
REBASE acronym: EcoDEC2C
Org_num: 9019
All begin ECDEC2C_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3591 | 79 aa hypothetical protein | |||
| 3592 | M | M.EcoO127I (99% identity) | M.EcoDEC2CORF3592P | |
| 3593 | S | S.EcoO127I (100% identity) | S.EcoDEC2CORF3592P | |
| 3594 | 218 aa hypothetical protein | |||
| 3595 | 355 aa hypothetical protein | |||
| 3596 | R | EcoO127I (82% identity) | EcoDEC2CORF3592P | |
| 3597 | istB-like ATP binding family protein | |||
| 5114 | transposase | |||
| 5115 | R | EcoECB1ORF9045P (100% identity) | EcoDEC2CORF5116P | |
| 5116 | M | M.EcoDEC2DORF4922P (100% identity) | M.EcoDEC2CORF5116P | |
| 5117 | S | S.EcoECB1ORF9045P (94% identity) | S.EcoDEC2CORF5116P | |
| 5118 | 529 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 916 | phage/conjugal plasmid C-4 type zinc finger, | |||
| 917 | M | M.EcoZ01ORF1668P (100% identity) | GATC | M.EcoDEC2CORF917P |
| 918 | bacteriophage replication protein | |||
| 1444 | membrane protein | |||
| 1447 | M | M.EcoS7438ORFNP (100% identity) | M.EcoDEC2CORF1447P | |
| 1448 | 65 aa hypothetical protein | |||
| 2042 | nonspecific DNA binding protein | |||
| 2043 | M | M.Sen94620ORF28085P (100% identity) | M.EcoDEC2CORF2043P | |
| 2046 | 38 aa hypothetical protein | |||
| 2349 | carboxylate/Amino Acid/Amine Transporter family | |||
| 2350 | V | V.EcoDEC2EDcmP (100% identity) | V.EcoDEC2CDcmP | |
| 2351 | M | M.EcoSC477DcmP (100% identity) | CCWGG | M.EcoDEC2CDcmP |
| 2352 | HD domain protein | |||
| 3932 | fis transcriptional dual regulator | |||
| 3933 | M | M.EcoS6995ORFBP (100% identity) | ATGCAT | M.EcoDEC2CORF3933P |
| 3934 | 37 aa hypothetical protein | |||
| 4044 | ribulose-phosphate 3-epimerase | |||
| 4045 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoDEC2CDamP |
| 4046 | sporulation related domain protein | |||
| 4931 | replication protein | |||
| 4932 | M | M.Sfl9783ORF197P (100% identity) | GATC | M.EcoDEC2CORF4932P |
| 4933 | lexA DNA binding domain protein | |||
| 5567 | 41 aa hypothetical protein | |||
| 5568 | M | M.Sso866ORF27155P (100% identity) | M.EcoDEC2CORF5568P | |
| 5569 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3616 | helicase conserved C-terminal domain protein | |||
| ??? | M | M.EcoR71ORF22205P (99% identity) | M.EcoDEC2CORF3617P | |
| 3619 | R | EcoSCU172ORF3240P (93% identity) | EcoDEC2CORF3617P | |