Salmonella enterica subsp. enterica serovar Heidelberg 41565 |
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Putative Salmonella enterica subsp. enterica serovar Heidelberg 41565 RM systems
Ref: Hoffmann,M. et al. J. Bacteriol. 194 (12), 3274-3275 (2012)
REBASE ref # 14622
GenBank #: AJHA00000000
REBASE acronym: Sen41565
Org_num: 9004
All begin SEEH1565_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3961 | Mrr restriction system protein | |||
| 3966 | R | StyUK1IIP (100% identity) | GAGNNNNNNGTRC | Sen41565ORF3971P |
| 3971 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNGTRC | M.Sen41565ORF3971P |
| 3976 | S | S1.Sen883ORF23840P (100% identity) | GAGNNNNNNGTRC | S.Sen41565ORF3971P |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6026 | 69 aa hypothetical protein | |||
| 6031 | R | Sens12373ORF19550P (100% identity) | Sen41565ORF6031P | |
| 6036 | metallothiol transferase FosB | |||
| 6066 | helicase family protein | |||
| 6071 | R | Ssp8103ORF19050P (100% identity) | Sen41565ORF6071P | |
| 6076 | 104 aa hypothetical protein | |||
| 8069 | M | M.YpsF1ORFCP (78% identity) | CCWGG | M.Sen41565ORF8069P |
| 8074 | nuclease | |||
| 6680 | DMT superfamily transporter inner | |||
| 6685 | V | V.StyTDcmP (100% identity) | V.Sen41565DcmP | |
| 6690 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.Sen41565DcmP |
| 6695 | hydrolase | |||
| 577 | bacteriophage protein | |||
| 582 | M | M.Sens12373ORF14090P (100% identity) | GATC | M.Sen41565ORF582P |
| 587 | exonuclease | |||
| 6056 | RM | Sens12373ORF19575P (100% identity) | GATCAG | Sen41565ORF6056P |
| 6061 | helicase family protein | |||
| 7080 | M | M.YpsF1ORFCP (21% identity) | CCWGG | M.Sen41565Dcm2P |
| 7085 | 55 aa hypothetical protein | |||
| 21021 | 284 aa hypothetical protein | |||
| ??? | M | M.YpsF1ORFDP (100% identity) | M.Sen41565ORFAP | |
| 21031 | DNA-binding plasmid partitioning protein | |||
| 2877 | global DNA-binding transcriptional dual | |||
| 2882 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen41565ORF2882P |
| 2887 | periplasmic protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2228 | major facilitator superfamily MFS_1 | |||
| 2233 | M | type III restriction-modification system StyLTI | M.Sen41565ORF2233P | |
| 24210 | M | type III restriction-modification system StyLTI | M.Sen41565ORF24210P | |
| 24215 | R | Sens12373ORF17180P (99% identity) | Sen41565ORF24210P | |
| 24220 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3956 | 95 aa hypothetical protein | |||
| 3961 | R | StyUK1MrrP (100% identity) | Sen41565MrrP | |
| 3966 | type I restriction enzyme EcoKI subunit R | |||