Salmonella enterica subsp. enterica serovar Heidelberg 41563 |
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Putative Salmonella enterica subsp. enterica serovar Heidelberg 41563 RM systems
Ref: Hoffmann,M. et al. J. Bacteriol. 194 (12), 3274-3275 (2012)
REBASE ref # 14622
GenBank #: AJGX00000000
REBASE acronym: Sen41563
Org_num: 9001
All begin SEEH1563_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9531 | endoribonuclease SymE | |||
| 9536 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen41563ORF9541P |
| 9541 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.Sen41563ORF9541P |
| 9546 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen41563ORF9541P |
| 9551 | Mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8523 | exonuclease | |||
| 8528 | M | M.Sens12373ORF14090P (100% identity) | GATC | M.Sen41563ORF8528P |
| 8533 | bacteriophage protein | |||
| 9376 | helicase family protein | |||
| 9381 | RM | Sens12373ORF19575P (100% identity) | GATCAG | Sen41563ORF9381P |
| 16221 | global DNA-binding transcriptional dual | |||
| 16226 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen41563ORF16226P |
| 16231 | periplasmic protein | |||
| 3099 | ribulose-phosphate 3-epimerase | |||
| 3104 | M | M.StyTDamP (100% identity) | GATC | M.Sen41563DamP |
| 3109 | cell division protein DamX | |||
| 9210 | DMT superfamily transporter inner | |||
| 9215 | V | V.StyTDcmP (100% identity) | V.Sen41563DcmP | |
| 9220 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.Sen41563DcmP |
| 9225 | hydrolase | |||
| 23744 | 308 aa hypothetical protein | |||
| 23749 | M | M.SspPIBORF23080P (100% identity) | M.Sen41563ORF23749P | |
| 23754 | p030 protein | |||
| 17869 | M | M.Ubap201ORF4P (87% identity) | CCWGG | M.Sen41563ORF17869P |
| 17874 | insertion element protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21658 | major facilitator superfamily MFS_1 | |||
| 21663 | M | M.SenZ223ORF2150P (100% identity) | CAGAG | M.Sen41563ORF21663P |
| 21668 | R | Sens12373ORF17180P (99% identity) | CAGAG | Sen41563ORF21663P |
| 21673 | terminal oxidase subunit I | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9546 | type I restriction enzyme EcoKI subunit R | |||
| 9551 | R | StyUK1MrrP (100% identity) | Sen41563MrrP | |
| 9556 | 95 aa hypothetical protein | |||