Salmonella enterica subsp. enterica serovar Heidelberg 41579 |
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Putative Salmonella enterica subsp. enterica serovar Heidelberg 41579 RM systems
Ref: Hoffmann,M. et al. J. Bacteriol. 194 (12), 3274-3275 (2012)
REBASE ref # 14622
GenBank #: AJGW00000000
REBASE acronym: Sen41579
Org_num: 9000
All begin SEEH1579_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10302 | endoribonuclease SymE | |||
| ??? | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen41579ORF10317P |
| 10317 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.Sen41579ORF10317P |
| 10322 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen41579ORF10317P |
| 10327 | Mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2530 | exonuclease | |||
| 2535 | M | M.Sens12373ORF14090P (100% identity) | GATC | M.Sen41579ORF2535P |
| 2540 | bacteriophage protein | |||
| 18273 | p030 protein | |||
| 18278 | M | M.SspPIBORF23080P (100% identity) | M.Sen41579ORF18278P | |
| 18283 | 308 aa hypothetical protein | |||
| 6087 | periplasmic protein | |||
| 6092 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen41579ORF6092P |
| 6097 | global DNA-binding transcriptional dual | |||
| 3312 | hydrolase | |||
| 3317 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.Sen41579DcmP |
| 3322 | V | V.StyTDcmP (100% identity) | V.Sen41579DcmP | |
| 3327 | DMT superfamily transporter inner | |||
| 9442 | R | Ubap201ORF4P (100% identity) | CCWGG | Sen41579ORF9447P |
| 9447 | M | M.Ubap201ORF4P (100% identity) | CCWGG | M.Sen41579ORF9447P |
| 9452 | insertion element protein | |||
| 13667 | ribulose-phosphate 3-epimerase | |||
| 13672 | M | M.StyTDamP (100% identity) | GATC | M.Sen41579DamP |
| 13677 | cell division protein DamX | |||
| 10147 | helicase family protein | |||
| 10152 | RM | Sens12373ORF19575P (100% identity) | GATCAG | Sen41579ORF10152P |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19203 | major facilitator superfamily MFS_1 | |||
| 19208 | M | M.SenZ223ORF2150P (100% identity) | CAGAG | M.Sen41579ORF19208P |
| 19213 | R | Sens12373ORF17180P (99% identity) | CAGAG | Sen41579ORF19208P |
| 19218 | terminal oxidase subunit I | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10322 | type I restriction enzyme EcoKI subunit R | |||
| 10327 | R | StyUK1MrrP (100% identity) | Sen41579MrrP | |
| 10332 | 95 aa hypothetical protein | |||