Streptomyces hygroscopicus subsp. jinggangensis 5008 |
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Putative Streptomyces hygroscopicus subsp. jinggangensis 5008 RM systems
Ref: Wu,H. and Bai,L. unpublished
REBASE ref # 14208
| Sequence length: | GenBank #: | |
| Chromosome: | 10,145,833 bp | CP003275 |
| plasmid pSHJG2: | 73,285 bp | CP003277 |
REBASE acronym: Shy5008
Org_num: 8596
All begin SHJG_, SHJG_p
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6165 | ATP-binding protein | |||
| 6166 | R | ShyTL1ORF5930P (100% identity) | Shy5008ORF6168P | |
| 6167 | S | 37 aa hypothetical protein | S.Shy5008ORF6168P | |
| 6168 | M | M.ShyTL1ORF5930P (100% identity) | M.Shy5008ORF6168P | |
| 6169 | 65 aa hypothetical protein | |||
| 7916 | traSA:integrase fusion protein | |||
| 7917 | M | M.ShyTL1ORF7679P (100% identity) | M.Shy5008ORF7917P | |
| ??? | S | S.ShyTL1ORF7679P (100% identity) | S.Shy5008ORF7917P | |
| 7918 | R | ShyTL1ORF7679P (100% identity) | Shy5008ORF7917P | |
| 7919 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4349 | 337 aa hypothetical protein | |||
| ??? | V | V.ShyTL1ORFEP (100% identity) | V.Shy5008ORFCP | |
| 4350 | R | R1.ShyTL1ORFEP (100% identity) | GCCGGC | R1.Shy5008ORFCP |
| ??? | M | M.ShyTL1ORFEP (100% identity) | M.Shy5008ORFCP | |
| ??? | R | R2.ShyTL1ORFEP (100% identity) | GCCGGC | R2.Shy5008ORFCP |
| 4351 | NUDIX hydrolase | |||
| 4574 | integral membrane protein | |||
| 4575 | M | M.ShyTL1ORF4337P (100% identity) | M.Shy5008ORF4575P | |
| 4576 | 233 aa conserved hypothetical cytosolic protein | |||
| 6420 | 170 aa hypothetical protein | |||
| ??? | R | ShyTL1ORFBP (100% identity) | GCGGCCGC | Shy5008ORFAP |
| ??? | M | M.ShyTL1ORFBP (100% identity) | GCGGCCGC | M.Shy5008ORFAP |
| 6421 | 120 aa hypothetical protein | |||
| 7799 | 364 aa hypothetical protein | |||
| 7800 | M | M.ShyTL1ORF7562P (100% identity) | M.Shy5008ORF7800P | |
| 7801 | serine/threonine protein kinase | |||
| 7802 | serine/threonine protein kinase | |||
| 7803 | helicase-like protein | |||
| 7804 | RM | ShyTL1ORF7566P (100% identity) | Shy5008ORF7800P | |
| 7805 | 40 aa hypothetical protein | |||
| 7813 | 132 aa hypothetical protein | |||
| ??? | RM | ShyTL1ORFAP (100% identity) | Shy5008ORF7814P | |
| 7816 | DNA polymerase III beta chain | |||
| 7965 | IS630 family transposase | |||
| 7966 | M | M.ShyTL1ORF7728P (100% identity) | M.Shy5008ORF7966P | |
| 7967 | 290 aa hypothetical protein | |||
| plasmid pSHJG2 | ||||
| 223 | 146 aa hypothetical protein | |||
| 224 | M | M.ShyTL1ORF224P (100% identity) | M.Shy5008ORF224P | |
| 225 | 155 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6164 | 242 aa hypothetical protein | |||
| ??? | R | ShyTL1ORFCP (100% identity) | Shy5008ORFBP | |
| 6165 | ATP-binding protein | |||