Salmonella enterica subsp. enterica serovar Senftenberg A4-543 |
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Putative Salmonella enterica subsp. enterica serovar Senftenberg A4-543 RM systems
Ref: den Bakker,H.C. et al. BMC Genomics 12, 425 (2011)
REBASE ref # 13961
GenBank #: AFCU00000000
REBASE acronym: Sen543
Org_num: 8452
All begin LTSESEN_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | S.SenSW70ORF19425P (97% identity) | S.Sen543ORF6593P | |
| 6593 | M | subunit M of type I restriction-modification | M.Sen543ORF6593P | |
| ??? | M | DNA methylase M | M.Sen543ORFBP | |
| ??? | R | type I restriction enzyme EcoKI subunit R | Sen543ORFCP | |
| ??? | R | type III restriction enzyme | Sen543ORFDP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1592 | bacteriophage protein | |||
| 1593 | M | M.SenSW70ORF5830P (100% identity) | GATC | M.Sen543ORF1593P |
| 1594 | phage intregrase | |||
| 1666 | exonuclease | |||
| 1667 | M | DNA adenine methylase | GATC | M.Sen543ORF1667P |
| 1669 | M | DNA adenine methylase | GATC | M.Sen543ORF1669P |
| 1670 | Replication gene A protein | |||
| 1762 | 52 aa hypothetical protein | |||
| 1763 | M | adenine methylase | GATC | M.Sen543ORF1763P |
| 1764 | 38 aa hypothetical protein | |||
| 1842 | metal-dependent phosphohydrolase | |||
| 1843 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen543DcmP |
| ??? | V | V.StyUK1DcmP (100% identity) | V.Sen543DcmP | |
| 1845 | Permease of the drug/metabolite transporter DMT | |||
| 3909 | 41 aa hypothetical protein | |||
| 3910 | M | M.SenSS209ORF4413P (48% identity) | GATC | M.Sen543ORF3910P |
| ??? | M | phage N-6-adenine-methyltransferase | GATC | M.Sen543ORFAP |
| 3912 | Cytosine methylase, phage-associated | |||
| ??? | phage N-6-adenine-methyltransferase | |||
| 3912 | M | M.Sen1697ORF8565P (100% identity) | GATC | M.Sen543ORF3912P |
| 3913 | protease 7 | |||
| 4309 | Replication gene A protein | |||
| 4310 | M | M.SenS321ORF3270P (96% identity) | GATC | M.Sen543ORF4310P |
| 4311 | ASCH domain-containing protein | |||
| 5203 | DNA-binding protein Fis | |||
| 5204 | M | M.Sen80013ORF4570P (100% identity) | ATGCAT | M.Sen543ORF5204P |
| 5205 | periplasmic protein | |||
| 5361 | Ribulose-phosphate | |||
| 5362 | M | M.StyTDamP (98% identity) | GATC | M.Sen543DamP |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 610 | metabolite transport protein | |||
| ??? | M | hypothetical protein | CAGAG | M.Sen543ORF611P |
| 613 | R | Sen80013ORF35070P (100% identity) | CAGAG | Sen543ORF611P |
| 614 | 53 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6598 | R | StyTMrrP (100% identity) | Sen543MrrP | |
| 6599 | 95 aa hypothetical protein | |||