Salmonella enterica subsp. enterica serovar Johannesburg S5-703 |
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Putative Salmonella enterica subsp. enterica serovar Johannesburg S5-703 RM systems
Ref: den Bakker,H.C. et al. BMC Genomics 12, 425 (2011)
REBASE ref # 13961
GenBank #: AFCP00000000
REBASE acronym: Sen703
Org_num: 8449
All begin LTSEJOH_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6180 | Phage integrase | |||
| ??? | S | 154 aa hypothetical protein SEEM010_13651 | S.Sen703ORFAP | |
| 6181 | M | M.SenSmo02ORF2495P (99% identity) | M.Sen703ORF6181P | |
| 6182 | R | SenSmo02ORF2465P (100% identity) | Sen703ORF6181P | |
| 6183 | Protein of unknown function DUF262 family | |||
| 6184 | 477 aa Hypothetical protein DUF262 | |||
| 6185 | S | S1.SenSmo02ORF2465P (100% identity) | GNNTAYNNNNNRTGG | S.Sen703ORF6186P |
| ??? | M | M1.SenSmo02ORF2465P (100% identity) | GNNTAYNNNNNRTGG | M.Sen703ORF6186P |
| 6187 | 41 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1382 | 76 aa hypothetical protein | |||
| 1383 | M | M.SenST203ORF4380P (94% identity) | GATC | M.Sen703ORF1383P |
| 2007 | M | DNA-cytosine methyltransferase | CCWGG | M.Sen703DcmP |
| 2008 | V | mismatch repair endonuclease | V.Sen703DcmP | |
| 3674 | 40 aa hypothetical protein | |||
| 3675 | M | M.Sen9981ORF7135P (91% identity) | M.Sen703ORF3675P | |
| 3676 | Phage EaA protein | |||
| 4885 | DNA-binding protein Fis | |||
| 4886 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen703ORF4886P |
| 4887 | periplasmic protein | |||
| 5008 | Ribulose-phosphate | |||
| 5009 | M | M.StyTDamP (95% identity) | GATC | M.Sen703DamP |
| 5773 | 131 aa hypothetical protein | |||
| 5774 | M | M.SenST203ORF20895P (95% identity) | GATC | M1.Sen703ORF5774P |
| 5775 | 75 aa hypothetical protein | |||
| 5776 | M | M.SenST203ORF20905P (100% identity) | M2.Sen703ORF5774P | |
| 5777 | Replication gene A protein | |||
| 5778 | 178 aa hypothetical protein | |||
| 5779 | M | M.SenST203ORF20920P (100% identity) | M.Sen703ORF5779P | |
| ??? | M | M.Sen9872IV (97% identity) | CTTAAG | M.Sen703ORFBP |
| ??? | R | Sen9872IVP (100% identity) | CTTAAG | Sen703ORFBP |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 690 | metabolite transport protein | |||
| ??? | M | hypothetical protein | CAGAG | M.Sen703ORF691P |
| 693 | R | Sens30601ORF17060P (100% identity) | CAGAG | Sen703ORF691P |
| 694 | cytoplasmic protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6189 | YpjF antitoxin | |||
| 6190 | R | Sen403MrrP (93% identity) | Sen703MrrP | |
| 6191 | R | Sen2977Mrr2P (100% identity) | Sen703Mrr2P | |
| 6192 | HNH nuclease | |||