Salmonella enterica subsp. enterica serovar Hvittingfoss A4-620 |
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Putative Salmonella enterica subsp. enterica serovar Hvittingfoss A4-620 RM systems
Ref: den Bakker,H.C. et al. BMC Genomics 12, 425 (2011)
REBASE ref # 13961
GenBank #: AFCN00000000
REBASE acronym: Sen620
Org_num: 8267
All begin LTSEHVI_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4484 | 53 aa hypothetical protein | |||
| 4485 | M | M.Sen14981ORF19755P (100% identity) | M.Sen620ORF4485P | |
| 4486 | S | S.Sen13832ORF11045P (66% identity) | S.Sen620ORF4485P | |
| 4487 | R | Sen14981ORF19755P (100% identity) | Sen620ORF4485P | |
| 4488 | 375 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1962 | metal-dependent phosphohydrolase | |||
| 1963 | M | M.Sens29855DcmP (100% identity) | CCWGG | M.Sen620DcmP |
| 1964 | V | V.StyTDcmP (100% identity) | V.Sen620DcmP | |
| 1965 | Permease of the drug/metabolite transporter DMT | |||
| 4612 | DNA-binding protein Fis | |||
| 4613 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen620ORF4613P |
| 4614 | periplasmic protein | |||
| 4735 | Ribulose-phosphate | |||
| ??? | M | M.SenRM079Dam3P (100% identity) | GATC | M.Sen620DamP |
| 4737 | DamX protein | |||
| 5930 | Phage integrase | |||
| 5931 | M | M.SenT075BORF19850P (100% identity) | GCTNAGC | M.Sen620ORF5931P |
| 5932 | R | SenT075BORF19850P (100% identity) | GCTNAGC | Sen620ORF5931P |
| 5933 | 38 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | type III restriction-modification system StyLTI enzyme mod | M.Sen620ORFAP | |
| 788 | M | Type 3 restriction-modification system | M.Sen620ORF788P | |
| 789 | R | Sen1927IP (99% identity) | Sen620ORF788P | |
| 790 | 57 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1937 | 329 aa hypothetical protein | |||
| 1938 | R | Sen14981MrrP (87% identity) | Sen620MrrP | |
| 1939 | 107 aa hypothetical protein | |||