Salmonella enterica subsp. enterica serovar Newport SL317 |
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Putative Salmonella enterica subsp. enterica serovar Newport SL317 RM systems
Ref: Fricke,W.F. et al. J. Bacteriol. 193 (14), 3556-3568 (2011)
REBASE ref # 13961
Contig set: 4,948,011 bp
GenBank #: ABEW00000000 (NZ_ABEW00000000)
REBASE acronym: Sen317
Org_num: 8155
All begin SNSL317_A
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | hypothetical protein | |||
| 2056 | M | M.Sens29927ORF20165P (100% identity) | CCGANNNNNGTC | M.Sen317ORF2056P |
| 2057 | S | S.Sens29927ORF20165P (100% identity) | CCGANNNNNGTC | S.Sen317ORF2056P |
| 2058 | R | Sens29927ORF20165P (100% identity) | CCGANNNNNGTC | Sen317ORF2056P |
| 2059 | transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3599 | periplasmic protein | |||
| 3600 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen317ORF3600P |
| 3601 | DNA-binding protein Fis | |||
| 4984 | protein DamX | |||
| 4985 | M | M.StyTDamP (100% identity) | GATC | M.Sen317DamP |
| 4986 | ribulose-phosphate 3-epimerase | |||
| 89 | metal dependent phosphohydrolase | |||
| 90 | M | M.Sens29927DcmP (100% identity) | CCWGG | M.Sen317DcmP |
| 91 | V | V.StyTDcmP (100% identity) | V.Sen317DcmP | |
| 92 | carboxylate/amino acid/amine transporter | |||
| 2092 | 191 aa conserved hypothetical protein | |||
| 2093 | M | M.SenXORF20255P (100% identity) | RCCGGY | M.Sen317ORF2093P |
| 2094 | 636 aa conserved hypothetical protein | |||
| 922 | 232 aa hypothetical protein | |||
| 923 | M | M.SenN1543ORF26190P (98% identity) | M.Sen317ORF923P | |
| 924 | recombination-associated protein RdgC | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2723 | major facilitator superfamily MFS_1 | |||
| 2724 | M | M.Sens29927ORF17960P (100% identity) | CAGAG | M.Sen317ORF2724P |
| 2725 | R | Sens29927ORF17960P (99% identity) | CAGAG | Sen317ORF2724P |
| 2726 | 44 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2052 | 44 aa hypothetical protein | |||
| ??? | R | SenN1660Mrr2P (100% identity) | Sen317MrrP | |
| 2056 | type I restriction-modification system, M | |||