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Putative Clostridium species BNL1100 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 15287
Complete sequence: 4,613,747 bp
GenBank #: CP003259
REBASE acronym: Csp1100
Org_num: 8369
All begin Clo1100_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
3384 | 334 aa hypothetical protein | |||
3385 | R | Psp0333ORF3465P (82% identity) | Csp1100ORF3387P | |
3386 | S | S.TspSWB20ORF1613P (41% identity) | S.Csp1100ORF3387P | |
3387 | 673 aa hypothetical protein | |||
3609 | 182 aa hypothetical protein | |||
3610 | R | Psp2237ORF3296P (92% identity) | Csp1100ORF3612P | |
3611 | S | S.Psp2237ORF3296P (88% identity) | S.Csp1100ORF3612P | |
3612 | M | M.Psp2237ORF3296P (92% identity) | M.Csp1100ORF3612P | |
3613 | Helix-turn-helix protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
228 | thioredoxin domain protein | |||
229 | R | CpaAI (48% identity) | CGCG | Csp1100ORF230P |
230 | M | M.RspFMBCY1ORF8870P (55% identity) | CGCG | M.Csp1100ORF230P |
231 | nitroreductase | |||
520 | Zn peptidase | |||
521 | R | CboSORFDP (59% identity) | GATC | Csp1100ORF522P |
522 | M | M.Cpr66HORF2800P (58% identity) | GATC | M.Csp1100ORF522P |
523 | 437 aa hypothetical protein | |||
565 | 167 aa hypothetical protein | |||
566 | M | DNA adenine methylase | M.Csp1100ORF566P | |
567 | 356 aa hypothetical protein | |||
1142 | 50 aa hypothetical protein | |||
1143 | M | M.Fpl113805ORF19270P (50% identity) | M.Csp1100ORF1143P | |
1144 | 300 aa hypothetical protein | |||
1144 | 300 aa hypothetical protein | |||
1145 | M | M.Lla8526ORF356P (76% identity) | CTSAG | M.Csp1100ORF1145P |
1146 | 81 aa hypothetical protein | |||
1364 | CHC2 zinc finger protein | |||
1365 | M | M.Ces4ORF15850P (64% identity) | M.Csp1100ORF1365P | |
1366 | histidine kinase | |||
3394 | 359 aa hypothetical protein | |||
3395 | R | Awo1030ORF6460P (69% identity) | CCGG | Csp1100ORF3396P |
3396 | M | M.Hma26143ORFBP (74% identity) | CCGG | M1.Csp1100ORF3396P |
3397 | restriction endonuclease | |||
3398 | M | M.DspTolMORF14185P (59% identity) | GCCGGC | M2.Csp1100ORF3396P |
3399 | 66 aa hypothetical protein | |||
3437 | 99 aa hypothetical protein | |||
3438 | M | M.Ddi21439ORF1341P (71% identity) | M.Csp1100ORF3438P | |
3439 | 186 aa hypothetical protein | |||
3459 | 144 aa hypothetical protein | |||
3460 | M | M.DspDCMORF1045P (90% identity) | M.Csp1100ORF3460P | |
3461 | 68 aa hypothetical protein | |||
3518 | 90 aa hypothetical protein | |||
3519 | M | M.CspSO15ORF771P (79% identity) | M.Csp1100ORF3519P | |
3520 | 186 aa hypothetical protein | |||
3545 | 147 aa hypothetical protein | |||
3546 | M | M.CspSO15ORF3747P (98% identity) | M.Csp1100ORF3546P | |
3547 | 67 aa hypothetical protein | |||
3594 | 267 aa hypothetical protein | |||
3595 | M | M2.GfeIRF9ORF23540P (75% identity) | M1.Csp1100ORF3595P | |
3596 | M | M.Baz2011ORF703P (92% identity) | M2.Csp1100ORF3595P | |
3597 | S-adenosylmethionine synthetase | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
3265 | 188 aa hypothetical protein | |||
3266 | R | CpaC7MrrP (97% identity) | Csp1100Mrr2P | |
3267 | transcriptional regulator | |||
3383 | Zn peptidase | |||
3384 | R | PmeBin180MrrP (80% identity) | Csp1100MrrP | |
3385 | type I restriction enzyme R protein |