Burkholderia species YI23 |
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Putative Burkholderia species YI23 RM systems
Ref: Lim,J.S. et al. unpublished
REBASE ref # 13830
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,131,280 bp | CP003087 |
| chromosome 2: | 1,773,019 bp | CP003088 |
| chromosome 3: | 1,569,570 bp | CP003089 |
| plasmid byi_2p: | 356,263 bp | CP003091 |
REBASE acronym: BspYI23
Org_num: 8011
All begin BYI23_A, BYI23_B, BYI23_C, BYI23_E
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1810 | transposase for insertion sequence | |||
| 1820 | M | M.BspNHORF22295P (94% identity) | M.BspYI23ORF1820P | |
| 1830 | anticodon nuclease | |||
| 1840 | S | S.Csu2576ORFDP (59% identity) | S.BspYI23ORF1820P | |
| 1850 | R | RsoT82ORF10920P (95% identity) | BspYI23ORF1820P | |
| 1860 | 162 aa hypothetical protein | |||
| chromosome 3 | ||||
| 7750 | Polypeptide-transport-associated domain protein | |||
| 7760 | R | Bco27620ORFFP (97% identity) | BspYI23ORF7740P | |
| 7770 | S | S.Bco27620ORFFP (58% identity) | S.BspYI23ORF7740P | |
| 7780 | M | M.Bco27620ORFFP (93% identity) | M.BspYI23ORF7740P | |
| 7790 | 128 aa hypothetical protein | |||
| 11870 | LysR family transcriptional regulator | |||
| 11880 | M | M.Bvi608ORF1865P (83% identity) | M.BspYI23ORF11880P | |
| 11890 | S | S.TsyCad16ORFCP (34% identity) | S.BspYI23ORF11880P | |
| 11900 | R | Bvi608ORF1865P (88% identity) | BspYI23ORF11880P | |
| 11910 | zinc metalloprotease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 10950 | 119 aa hypothetical protein | |||
| 10960 | M | M.CspTF1N1ORFAP (75% identity) | M.BspYI23ORF10960P | |
| 10970 | 99 aa hypothetical protein | |||
| 11700 | tryptophan synthase, alpha chain | |||
| 11710 | M | M.BspKK1ORF23440P (99% identity) | M.BspYI23ORF11710P | |
| 11720 | tryptophan synthase, beta subunit | |||
| plasmid byi_2p | ||||
| 1260 | 114 aa hypothetical protein | |||
| 1270 | M | M.BspSFA1ORF80280P (100% identity) | CAGCTG | M.BspYI23ORF1270P |
| 1280 | nuclear protein SET | |||
| 2520 | transposase for insertion sequence IS6100 | |||
| 2530 | M | M.SyaA3ORF33050P (100% identity) | M.BspYI23ORF2530P | |
| 2540 | 358 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 10680 | 476 aa hypothetical protein | |||
| 10690 | R | PspNE5MrrP (75% identity) | BspYI23MrrP | |
| 10700 | phage head morphogenesis protein | |||