Streptococcus suis D12 |
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Putative Streptococcus suis D12 RM systems
Ref: Hu,P. et al. unpublished
REBASE ref # 13666
Complete sequence: 2,183,059 bp
GenBank #: CP002644
REBASE acronym: SsuD12
Org_num: 7874
All begin SSUD12_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 901 | 65 aa conserved hypothetical protein | |||
| 902 | M | M.SanVSI16ORF6495P (63% identity) | M.SsuD12ORF902P | |
| 903 | S | S.Gsp570ORF3500P (23% identity) | S.SsuD12ORF902P | |
| 904 | gid protein | |||
| 1427 | ribose 5-phosphate isomerase A | |||
| 1428 | M | M.Ssu1112SORF4430P (98% identity) | M.SsuD12ORF1428P | |
| 1429 | 280 aa hypothetical protein | |||
| 1430 | 177 aa hypothetical protein | |||
| 1431 | S | S.SsuLS9NORFKP (62% identity) | S.SsuD12ORF1428P | |
| 1432 | 216 aa hypothetical protein | |||
| 1433 | R | SsuLS9NORFKP (96% identity) | SsuD12ORF1428P | |
| 1434 | tRNA modification GTPase TrmE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 35 | bifunctional purine biosynthesis protein PurH | |||
| 36 | M | M2.SsuF001ORF2535P (90% identity) | GATC | M1.SsuD12ORF36P |
| ??? | M | M2.Ssu4109I (100% identity) | GATC | M2.SsuD12ORF36P |
| 38 | R | R2.SsuF001ORF2535P (99% identity) | GATC | R1.SsuD12ORF36P |
| 39 | R | R1.SsuF001ORF2535P (99% identity) | GATC | R2.SsuD12ORF36P |
| 40 | phosphoribosylamine--glycine ligase | |||
| 443 | 446 aa conserved hypothetical protein | |||
| 444 | M | M.SsuLSS42ORF2340P (100% identity) | M1.SsuD12ORF444P | |
| 445 | M | M.SsuLSS42ORF2345P (100% identity) | GCNGC | M2.SsuD12ORF444P |
| 446 | R | SsuLSS42ORF2345P (100% identity) | GCNGC | SsuD12ORF444P |
| 447 | 353 aa hypothetical protein | |||
| 1175 | 82 aa hypothetical protein | |||
| 1176 | M | M1.SphD12ORF31P (100% identity) | M1.SsuD12ORF1176P | |
| 1177 | M | M2.SphD12ORF31P (100% identity) | M2.SsuD12ORF1176P | |
| 1178 | 153 aa hypothetical protein | |||
| 1194 | 393 aa hypothetical protein | |||
| 1195 | R | SphD12ORF52P (100% identity) | CCNGG | R1.SsuD12ORF1197P |
| 1196 | R | R1.SsucAKJ18ORF2970P (94% identity) | R2.SsuD12ORF1197P | |
| 1197 | M | M1.SphD12ORF52P (100% identity) | M1.SsuD12ORF1197P | |
| 1198 | M | M2.SphD12ORF52P (100% identity) | M2.SsuD12ORF1197P | |
| 1199 | C | C.SsucAKJ18ORF2970P (100% identity) | C.SsuD12ORF1197P | |
| 1200 | Phage transcriptional repressor | |||
| 1337 | 142 aa conserved hypothetical protein | |||
| 1338 | M | M.Spo10924ORF1043P (99% identity) | M.SsuD12ORF1338P | |
| 1339 | 31 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 929 | GMP synthase | |||
| 930 | R | Ssu39565McrCP (100% identity) | SsuD12McrCP | |
| 931 | ATPase associated with various cellular | |||
| 930 | 5-methylcytosine-specific restriction enzyme | |||
| 931 | R | Ssu1081McrBP (98% identity) | SsuD12McrB2P | |
| 932 | 262 aa hypothetical protein | |||