Streptomyces species SirexAA-E |
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Putative Streptomyces species SirexAA-E RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 13445
| Sequence length: | GenBank #: | |
| Chromosome: | 7,372,760 bp | ADFD00000000 (NZ_ADFD00000000) |
| Chromosome: | 7,414,440 bp | CP002993 |
REBASE acronym: SspAAE
Org_num: 7743
All begin SACTE_, SACTEDRAFT_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2125 | protein of unknown function DUF45 | |||
| 2126 | R | San02ORF26230P (97% identity) | SspAAEORF2129P | |
| 2127 | pseudogene | |||
| 2128 | S | S.Sgl56ORF22985P (55% identity) | S.SspAAEORF2129P | |
| 2129 | M | M.Sgl01745ORF24445P (98% identity) | M.SspAAEORF2129P | |
| 2130 | 227 aa hypothetical protein | |||
| 2877 | Glucan endo-1,3-beta-D-glucosidase | |||
| 2878 | R | Ssp622ORF21935P (96% identity) | SspAAEORF2880P | |
| 2879 | S | S.Ssp37ORF11545P (33% identity) | S.SspAAEORF2880P | |
| 2880 | M | M.Ssp25ORF28595P (87% identity) | M.SspAAEORF2880P | |
| 2881 | NUDIX hydrolase | |||
| 4307 | GTP-binding protein YchF | |||
| 4308 | M | M.SirHORF3837P (96% identity) | M.SspAAEORF4308P | |
| 4309 | S | S.Csp9H8ORFCP (39% identity) | S.SspAAEORF4308P | |
| 4310 | R | SspBHT52ORF11505P (97% identity) | SspAAEORF4308P | |
| 4311 | 135 aa conserved hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2563 | integral membrane protein | |||
| 2564 | M | M.Sha2ORF19705P (84% identity) | M.SspAAEORF2564P | |
| 2565 | 273 aa hypothetical protein | |||
| 2894 | 311 aa conserved hypothetical protein | |||
| 2895 | M | M.Ssp55ORF30690P (95% identity) | M.SspAAEORF2895P | |
| 2896 | NLP/P60 protein | |||
| 3467 | 348 aa hypothetical protein | |||
| 3468 | R | Ssp111ORF48880P (98% identity) | CTGCAG | SspAAEORF3469P |
| 3469 | M | M.Ssp111ORF48880P (98% identity) | CTGCAG | M.SspAAEORF3469P |
| 3470 | pseudogene | |||
| 5779 | pseudogene | |||
| 5780 | M | M.Ssp763ORF35030P (60% identity) | M.SspAAEORF5780P | |
| 5781 | 292 aa conserved hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4674 | transcriptional regulator, GntR family | |||
| 4675 | R | SspAAEORF2333P (100% identity) | SspSA3ORFAP | |
| 4676 | 449 aa hypothetical protein | |||
| Chromosome | ||||
| 2332 | transcriptional regulator, GntR family | |||
| 2333 | R | SspSA3ORFAP (100% identity) | SspAAEORF2333P | |
| 2334 | regulatory protein | |||