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Putative Acidovorax species JS42 RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref # 9922
Sequence length: | GenBank #: | |
Chromosome: | 4,448,856 bp | CP000539 (NC_008782) |
plasmid pAOVO01: | 72,689 bp | CP000540 (NC_008765) |
plasmid pAOVO02: | 63,609 bp | CP000541 (NC_008766) |
REBASE acronym: AspJS
Org_num: 4670
All begin Ajs_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2615 | transcriptional regulator, ArsR family | |||
2616 | M | M.Dsp3050ORF7015P (99% identity) | M.AspJSORF2616P | |
2617 | 185 aa hypothetical protein | |||
2618 | R | Dsp3050ORF7015P (99% identity) | AspJSORF2616P | |
2619 | 174 aa hypothetical protein | |||
3605 | SMC domain protein | |||
3606 | R | Dsp3051ORF16555P (98% identity) | AspJSORF3609P | |
3607 | S | S.NeuORF2522P (99% identity) | S.AspJSORF3609P | |
3608 | transcriptional regulator | |||
3609 | M | M2.PbaEC28ORF19080P (97% identity) | M2.AspJSORF3609P | |
3610 | M | M1.PchAW1ORF22475P (98% identity) | M1.AspJSORF3609P | |
3611 | 65 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
194 | two component transcriptional regulator, winged | |||
195 | RM | Dsp3051ORF12035P (100% identity) | AspJSORF195AP | |
196 | DNA-damage-inducible protein D | |||
197 | RM | M.Dsp3051ORF12025P (90% identity) | AspJSORF195BP | |
198 | type III restriction system endonuclease, | |||
197 | Eco57I restriction endonuclease | |||
198 | RM | AcrJFORF2421P (80% identity) | AspJSORF198P | |
199 | major facilitator superfamily MFS_1 | |||
425 | FAD linked oxidase domain protein | |||
426 | M | M.TinORF106P (79% identity) | RGATCY | M.AspJSORF426P |
427 | R | TinORF107P (85% identity) | AspJSORF426P | |
428 | formyltetrahydrofolate deformylase | |||
565 | 82 aa hypothetical protein | |||
566 | M | M.DspMNS0ORF3060P (96% identity) | GATC | M.AspJSORF566P |
567 | 158 aa conserved hypothetical protein | |||
1308 | 252 aa conserved hypothetical protein | |||
1309 | M | M.AspJSORF1444P (100% identity) | M.AspJSORF1309P | |
1311 | DNA topoisomerase III | |||
1443 | 252 aa conserved hypothetical protein | |||
1444 | M | M.AspJSORF1309P (100% identity) | M.AspJSORF1444P | |
1445 | DNA topoisomerase III | |||
2195 | phage transcriptional regulator, AlpA | |||
2196 | M | M.PaeMH27ORF4688P (100% identity) | M.AspJSORF2196P | |
2197 | V | V.PaeMH27ORF4688P (100% identity) | V.AspJSORF2196P | |
2198 | helicase domain protein | |||
2198 | helicase domain protein | |||
2199 | RM | Pae14690ORFDP (62% identity) | AspJSORF2199AP | |
2200 | transposase, IS204/IS1001/IS1096/IS1165 family | |||
2201 | RM | Pae14690ORFDP (37% identity) | AspJSORF2199BP | |
2202 | DNA mismatch repair enzyme (predicted | |||
2201 | 512 aa hypothetical protein | |||
2202 | R | PaeMH27ORF4690P (98% identity) | GTCGAC | AspJSORF2202P |
2203 | helicase domain protein | |||
2529 | 684 aa conserved hypothetical protein | |||
2530 | RM | PaePD2aORF4315P (79% identity) | AspJSORF2530P | |
2531 | phage transcriptional regulator, AlpA | |||
plasmid pAOVO01 | ||||
4213 | phosphatidylserine/phosphatidylglycerophosphate/ | |||
4214 | M | M.CteYAZ2ORF49990P (100% identity) | M.AspJSORF4214P | |
4215 | 73 aa hypothetical protein | |||
plasmid pAOVO02 | ||||
4251 | 72 aa conserved hypothetical protein | |||
4252 | M | M2.Dac909ORF310P (100% identity) | GCCGGC | M.AspJSORF4252P |
4253 | R | Dac909ORF310P (100% identity) | GCCGGC | AspJSORF4252P |
4254 | 68 aa hypothetical protein | |||
4257 | 176 aa conserved hypothetical protein | |||
4258 | M | M1.Dac909ORF310P (100% identity) | M.AspJSORF4258P | |
4259 | 143 aa conserved hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
4077 | riboflavin synthase alpha chain | |||
4078 | R | DspMNS0ORF18205P (100% identity) | AspJSORF4081P | |
4079 | 200 aa hypothetical protein | |||
4080 | 397 aa conserved hypothetical protein | |||
4081 | M | M.Dsp3051ORF13700P (98% identity) | M.AspJSORF4081P | |
4082 | integral membrane sensor signal transduction | |||
4094 | Spermine synthase | |||
4095 | R | Dsp3050ORF18655P (99% identity) | AspJSORF4096P | |
4096 | M | M.Dsp3051ORF13610P (99% identity) | M.AspJSORF4096P | |
4097 | protein of unknown function DUF350 |